I think 6/8 makes decent sense as it preserves the 2-beats per measure while also allowing for 3-beat subdivisions. Here's a rough working interpretation of how it would go.
Oh, SHEN an DOE--, I LOVE your DAUGH ter
(pickup) 1 3 4 6 1 3 4 6
A a WAY, you ROLL-ing RI-ver
1 3 4 6 1 3 4 6
I put this tune in MuseScore and it didn't sound awful but it is a bit jumpy. Here's how it sounds for anyone who has a hard time following that: https://youtu.be/OQfNaZ2hzKY
(Ignore the ungodly abomination that is the [lack of] key signature in that transcription, I was mostly focused on the tune)