A text transcript appears at the first link now, but may have been added since the thread started. The opening link also is available directly from MSNBC, with transcript, at 'Beginning of the end of America'
You can find transcripts of recent Countdown shows, among others, at MSNBC Transcripts The program for the first "Special Report" in this thread appears at the end of the 18 October 2006 program transcript.
I'm still looking for a transcript of the piece on Rumsfeld that Amos linked up above. I think I remember loading the video somewhile back, but I'd rather have text, and the link doesn't - as far as I can tell - have any broadcast date shown.
Searching was interrupted by the need for a battery transplant on my mouse. You don't suppose "they" killed it on purpose?